Integration of AFLPs, SSRs and SNPs markers into a new genetic map of industrial chicory (Cichorium intybus L. var. sativum)

C. Muys; C.-N. Thienpont; N. Dauchot; O. Maudoux; X. Draye; Pierre Van Cutsem

doi:10.1111/pbr.12113

Integration of AFLPs, SSRs and SNPs markers into a new genetic map of industrial chicory (Cichorium intybus L. var. sativum)

C. Muys, C.-N. Thienpont, N. Dauchot, O. Maudoux, X. Draye, Pierre Van Cutsem

Unit of Research in Plant Cellular and Molecular Biology

Research output: Contribution to journal › Article › peer-review

Abstract

A chicory genetic map of 1208 cM has been created using 247 F plants and 237 markers (170 AFLP, 28 SSR, 27 EST-SNP and 12 EST-SSR). This map covers 84% of the chicory genome. The chicory-genic-markers-associated sequences were used to find potential orthologs in mapped lettuce ESTs from the Compositae Genome Project Database. Twenty-seven putative orthologous pairs were retained, pinpointing seven putative blocks of synteny that covered 11% of the chicory genome and 13% of the lettuce genome, opening new perspectives for the analysis of these two species.

Original language	English
Journal	Plant Breeding
DOIs	https://doi.org/10.1111/pbr.12113
Publication status	Accepted/In press - 1 Jan 2013

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title = "Integration of AFLPs, SSRs and SNPs markers into a new genetic map of industrial chicory (Cichorium intybus L. var. sativum)",

abstract = "A chicory genetic map of 1208 cM has been created using 247 F plants and 237 markers (170 AFLP, 28 SSR, 27 EST-SNP and 12 EST-SSR). This map covers 84% of the chicory genome. The chicory-genic-markers-associated sequences were used to find potential orthologs in mapped lettuce ESTs from the Compositae Genome Project Database. Twenty-seven putative orthologous pairs were retained, pinpointing seven putative blocks of synteny that covered 11% of the chicory genome and 13% of the lettuce genome, opening new perspectives for the analysis of these two species.",

author = "C. Muys and C.-N. Thienpont and N. Dauchot and O. Maudoux and X. Draye and {Van Cutsem}, Pierre",

year = "2013",

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T1 - Integration of AFLPs, SSRs and SNPs markers into a new genetic map of industrial chicory (Cichorium intybus L. var. sativum)

AU - Muys, C.

AU - Thienpont, C.-N.

AU - Dauchot, N.

AU - Maudoux, O.

AU - Draye, X.

AU - Van Cutsem, Pierre

PY - 2013/1/1

Y1 - 2013/1/1

N2 - A chicory genetic map of 1208 cM has been created using 247 F plants and 237 markers (170 AFLP, 28 SSR, 27 EST-SNP and 12 EST-SSR). This map covers 84% of the chicory genome. The chicory-genic-markers-associated sequences were used to find potential orthologs in mapped lettuce ESTs from the Compositae Genome Project Database. Twenty-seven putative orthologous pairs were retained, pinpointing seven putative blocks of synteny that covered 11% of the chicory genome and 13% of the lettuce genome, opening new perspectives for the analysis of these two species.

AB - A chicory genetic map of 1208 cM has been created using 247 F plants and 237 markers (170 AFLP, 28 SSR, 27 EST-SNP and 12 EST-SSR). This map covers 84% of the chicory genome. The chicory-genic-markers-associated sequences were used to find potential orthologs in mapped lettuce ESTs from the Compositae Genome Project Database. Twenty-seven putative orthologous pairs were retained, pinpointing seven putative blocks of synteny that covered 11% of the chicory genome and 13% of the lettuce genome, opening new perspectives for the analysis of these two species.

UR - http://www.scopus.com/inward/record.url?scp=84886068876&partnerID=8YFLogxK

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DO - 10.1111/pbr.12113

M3 - Article

SN - 0179-9541

JO - Plant Breeding

JF - Plant Breeding

ER -

Integration of AFLPs, SSRs and SNPs markers into a new genetic map of industrial chicory (Cichorium intybus L. var. sativum)

Abstract

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